Lower respiratory tract infection (LRTI) is the most lethal infection remains among patients undergoing treatment for cancer. Most of the previous studies with cancer patients have focus on blood stream infections. For that reason the aim of our study was to examine the spectrum and recent trends in antimicrobial resistance of Gram negative bacteria (GNB) recovered from cancer patient having LRTI in Egypt. In addition our objective was to investigate the prevalence and distribution of Legionella pneumophila among cancer patients with LRTI. Sputum specimens were collected from 285 cancer patients suspecting of having LRTI. The conventional methods and Microscan Negative Identification panel Type 2 were used for identification of GNB. Susceptibility was assessed for 20 antibiotics in bacterial isolates using agar diffusion method. All the sputum specimens were tested by culture and genus specific PCR for the detection of Legionella pneumophila. A total of 130 GNB were isolated. Among these, Klebsiella pneumoniae was the most common (35.4 %). We isolated and identified a number of less frequent GNB (17%), whereas no Legionella pneumophila was detected. Amikacin was found to be the most effective antimicrobial against GNB. We reported very high percentage of multi-drug resistance GNB (96%). This study reported the development of multidrug resistance Gram negative bacilli in Egypt. Continuous updating of data on antimicrobial susceptibility profiles is required to ensure the efficacy of antimicrobial agents against GNB due to continuous development of antimicrobial resistance patterns among these pathogens.
Published in | American Journal of Biomedical and Life Sciences (Volume 3, Issue 2) |
DOI | 10.11648/j.ajbls.20150302.13 |
Page(s) | 25-32 |
Creative Commons |
This is an Open Access article, distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium or format, provided the original work is properly cited. |
Copyright |
Copyright © The Author(s), 2015. Published by Science Publishing Group |
Lower Respiratory Tract Infection, Cancer Patients, Gram-Negative Bacteria, Legionella Pneumophila
[1] | Oh YW, Effmann EL, Godwin JD (2000) Pulmonary infections in immunocompromised hosts: the importance of correlating the conventional radiologic appearance with the clinical setting. Radiology 217: 647-56. |
[2] | Renaud C, Campbell AP (2011) Changing epidemiology of respiratory viral infections in hematopoietic cell transplant recipients and solid organ transplant recipients. Curr Opin Infect Dis 24:333–43. |
[3] | Woodhead M, Blasi F, Ewig S, Garau J, Huchon G, Leven M (2011) Guidelines for the management of adult lower respiratory tract infections - Full version. Clin Microbiol Infect 17 Suppl 6: E1-59. |
[4] | Kim YJ, Boeckh M, Englund JA (2007) Community respiratory virus infections in immunocompromised patients: Hematopoietic stem cell and solid organ transplant recipients, and individuals with human immunodeficiency virus infection. Semin Respir Crit Care Med 28(2):222–242. |
[5] | Junghanss C, Marr KA, Carter RA, Sandmaier BM, Maris MB, Maloney DG, Chauncey T, McSweeney PA, Storb R (2002) Incidence and Outcome of Bacterial and Fungal Infections following Nonmyeloablative Compared with myeloablative allogeneic hematopoietic stem cell transplantation: a matched control study. Biology of Blood and Marrow Transplantation 8:512-520. |
[6] | Clark JG, Crawford SW (1978) Diagnostic Approaches to pulmonary complications of marrow transplantation. Chest 1028-34. |
[7] | Harrington RD, Woolfrey AE, Bowden R, McDowell MG, Hackman RC (1996) Legionellosis in a bone marrow transplant center. Bone Marrow Transplant 18(2): 361-8. |
[8] | Stout JE, Yu VL (2003) Hospital-acquired Legionnaires’disease: new developments. Curr Opin Infect Dis 16: 337–341. |
[9] | Reingold AL, Thomason BM, Brake BJ, Thacker L, Wilkinson HW, Kuritsky JN (1984) Legionella pneumonia in the United States: the distribution of serogroups and species causing human illness. J Infect Dis 149:819. |
[10] | Munder RU (2000) Other Legionella Species. In Mandell GL, Bennett JE, Dolin R, editors. Principles and practice of infectious diseases, 5th edition. vol. 2. Churchill Livingstone, Philadelphia, 2435–2441. |
[11] | Yu VL (2000) Legionella pneumophila. In Mandell GL, Bennett JE, Dolin R, editors. Principles and practice of infectious diseases, 5th edition. vol. 2. Churchill Livingstone, Philadelphia, 2424–2435. |
[12] | Pop-Vicas AE, D’Agata EMC (2005) The rising influx of multidrug-resistant Gram-negative bacilli into a tertiary care Hospital. Clin Infect Dis 40: 1792-1798. |
[13] | Schwaber MJ, Navon-Venezia S, Kaye KS, Ben-Ami R, Schwartz D, Carmeli Y (2006) Clinical and economic impact of bacteremia with extended spectrum--lactamase-producing enterobacteriaceae. Antimicrobial Agents and Chemotherapy 50(4): 1257–1262. |
[14] | Winn WJ, Allen S, Janda W, Koneman EW, Procop G, Schreckenberger P, Wood G (2006) Color Atlas and Textbook of Diagnostic Microbiology, sixth edition. Philadelphia, Lippincott Co. J Clin Microbiol 32: 209-210. |
[15] | Ingram JG, Plouffe JF (1994) Danger of sputum purulence screens in culture of Legionella species. |
[16] | Morrill WE, Barbaree JM, Fields BS, Sanden GN, Martin WT (1990) Increased recovery of Legionella micdadei and Legionella bozemanii on buffered charcoal yeast extract agar supplemented with albumin. J Clin Microbiol 28:616–8. |
[17] | 1Clinical and Laboratory Standards Institute (CLSI) (2011) Performance standards for Antimicrobial Susceptibility Testing; Twenty First Informational Supplements. CLSI Document M100-S21, Wayne PA. |
[18] | 1Magiorakos AP, Srinivasan A, Carey RB, Carmeli Y, Falagas ME, Giske CG, Harbarth S, Hindler JF, Kahlmeter G, Olsson-Liljequist B, Paterson DL, Rice LB, Stelling J, Struelens MJ, Vatopoulos A, Weber JT, Monnet DL (2012) Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance. Clin Microbiol Infect 18: 268–281. |
[19] | Rantakokko-Jalava K, Jalava J (2001) Development of Conventional and Real-Time PCR Assays for Detection of Legionella DNA in Respiratory Specimens. J. Clin. Microbiol 39(8): 2904–2910. |
[20] | Nosari A, Barberis M, Landonio G, Magnani P, Majno M, Oreste P, Sozzi P (1991) Infections in haematologic neoplasms: autopsy findings. Haematologica 76 (2):135–140. |
[21] | Homsi J, Walsh D, Panta R, Lagman R, Nelson KA, Longworth DL (2000) Infectious complications of advanced cancer. Support Care Cancer 8(6):487–492. |
[22] | Glauser MP, Zinner SH (1982) Mechanisms of acquisition and development of bacterial infections in cancer patients. In Klastersky J editors. Infections in cancer patients. New York: Raven Press. 13–30. |
[23] | Stosor V, Zembower TR (2014) Epidemiology of Infections in Cancer Patients. Cancer Treatment and Research 161: 43-89. |
[24] | Montassier E, Batard E, Gastinne T, Potel G, de La Cochetière MF (2013) Recent changes in bacteremia in patients with cancer: a systematic review of epidemiology and antibiotic resistance. Eur J Clin Microbiol Infect Dis 32(7):841-850. |
[25] | Gudiol C, Bodro M, Simonetti A, Tubau F, González-Barca E, Cisnal M, Domingo-Domenech E, Jiménez L, Carratalà J (2013) Changing aetiology, clinical features, antimicrobial resistance, and outcomes of bloodstream infection in neutropenic cancer patients. Clin Microbiol Infect 19 (5):474-479. |
[26] | Shyamala R, Rao J (2014) Klebsiella pneumonia: A common pathogen causing bacterial pneumonia in a teaching hospital. J. Microbiol. Biotech. Res 4 (1):7-10. |
[27] | Gonlugur U, Bakici MZ, Akkurt I, Efeoglu T (2004) Antibiotic susceptibility patterns among respiratory isolates of Gram-negative bacilli in a Turkish university hospital. BMC Microbiol 4: 32. |
[28] | Vishwanath S, Chawla K, Gopinathan A (2013) Multidrug resistant Gram-negative bacilli in lower respiratory tract infections. Iran. J. Microbiol 5: 323-327. |
[29] | Oudhuis GJ, Verbon A, Hoogkamp-Korstanje JA, Stobberingh EE (2008) Susceptibility Surveillance Study Group. Susceptibility Surveillance Study Group. Antimicrobial resistance in Escherichia coli and Pseudomonas aeruginosa from Intensive Care Units in The Netherlands, 1998-2005.Int J Antimicrob Agents 31:58-63. |
[30] | Goel N, Chaudhary U, Aggarwal R, Bala K (2009) Antibiotic sensitivity pattern of Gram negative bacilli isolated from the lower respiratory tract of ventilated patients in the Intensive care unit. Indian J Crit Care Med 13: 148-151. |
[31] | Brooke JS (2012) Stenotrophomonas maltophilia: an emerging global opportunistic pathogen. Clinical Microbiology Reviews 25 (1):2-41. |
[32] | Priyamvada R, Nishat HA, Indu B, Grover RK (2014): Antimicrobial Susceptibility Pattern of Burkholderia cepacia Isolates from Patients with Malignancy. J Glob Infect Dis 6(2): 90–91 |
[33] | Šiširak M, Hukić M (2013) An outbreak of multidrug-resistant Serratia marcescens: The importance of continuous monitoring of nosocomial infections. Acta Medica Academica 42(1):25-31. |
[34] | Yang G, Benson R, Pelish T, Brown E, Winchell JM, Fields B (2010) Dual detection of Legionella pneumophila and Legionella species by real-time PCR targeting the 23S-5S rRNA gene spacer region. Clin Microbiol Infect 16: 255–261. |
[35] | Murdoch DR (2003) Diagnosis of Legionella infection. Clin Infect Dis 36: 64-9. |
[36] | 36-O’Neill E, Humphreys H (2005) Surveillance of hospital water and primary prevention of nosocomial legionellosis: what is the evidence? J Hosp Infect 59: 273–279. |
[37] | Qasem JA, Mustafa AS, Khan ZU (2008) legionella in clinical specimens and hospital water supply facilities: molecular detection and genotyping of the isolates. Med Princ Pract 17:49–55. |
[38] | Salem MM, Muharram M, Alhosiny IM (2010) Distribution of Classes 1 and 2 Integrons among multi drug resistant E. coli isolated from hospitalized patients with urinary tract infection in Cairo, Egypt. Australian Journal of Basic and Applied Sciences 4:398-407. |
[39] | Sahuquillo-Arce JM, Selva M, Perpin˜a´n H, Gobernado M, Armero C, López-Quílez A, González F, Vanaclocha H (2011) Antimicrobial resistance in more than 100,000 Escherichia coli isolates according to culture site and patient age, gender, and location. Antimicrob Agents Chemother 55:1222-1228. |
[40] | Gafter-Gvili A, Paul M, Fraser A, Leibovici L (2007) Effect of quionolone prophylaxis in afebrile neutropenic patients on microbial resistance: systematic review and meta-analysis. J Antimicrob Chemother 59: 5–22. |
[41] | Freifeld AG, Bow EJ, Sepkowitz KA, Boeckh MJ, Ito JI., Mullen CA, Raad II, Kenneth V, Rolston KV, Young JH, Wingard JR (2011) Clinical practice guidelines for the use of antimicrobial agents in neutropenic patients with cancer: 2010 update by the Infectious Diseases Society of America. Clin Infect Dis 52: e56–e93. |
[42] | Jadhav S, Misra R, Gandham N, Ujagare M, Ghosh P, Angadi K Vyawahare C (2012) Increasing Incidence of Multidrug Resistance Klebsiella Pneumoniae Infections In Hospital And Community Settings. Inter J Microbiol. Res 4 (6): 253-257. |
[43] | El-Kholy A, Baseem H, Hall GS, Procop GW, Longworth DL (2003) Antimicrobial resistance in Cairo, Egypt 1999-2000: A survey of five hospitals. J Antimicrob Chemother 51: 625-630. |
[44] | Aeschlimann J (2003) The role of multidrug efflux pumps in the antibiotic resistance of Pseudomonas aeruginosa and other gram-negative bacteria. Pharmacotherapy 23(7): 916–924. |
[45] | Saied GM (2006) Microbial pattern and antimicrobial resistance, a surgeon's perspective: retrospective study in surgical wards and seven intensive-care units in two university hospitals in Cairo, Egypt. Dermatology 212(Suppl 1):8-14. |
[46] | Oliveira AL, Souza M, Carvalho-Dias VM, Ruiz MA, Silla L, Tanaka PY, Simões P, Trabasso P, Seber A, Lotfi CJ, Zanichelli MA, Araujo VR, Godoy C, Maiolino A, Urakawa P, Cunha CA, de Souza CA, Pasquini R, Nucci M (2007) Epidemiology of bacteremia and factors associated with multi-drug-resistant Gram-negative bacteremia in hematopoietic stem cell transplant recipients. Bone Marrow Transplant 39: 775–781. |
[47] | Gudiol C, Tubau F, Calatayud L, Garcia-Vidal C, Cisnal M, Sánchez-Ortega I, Duarte R, Calvo M, Carratalà J (2011) Bacteraemia due to multidrug resistant gram-negative bacilli in cancer patients: risk factors, antibiotic therapy and outcomes. J Antimicrob Chemother 66: 657– 663. |
APA Style
Salwa Selim Afifi, Zeinab Helal Helal, Safaa Shawky Hassan, Sally Tohamy Kamal. (2015). Analysis of GNB Species and Pattern of Resistance Responsible for LRTI in Patients with Cancer. American Journal of Biomedical and Life Sciences, 3(2), 25-32. https://doi.org/10.11648/j.ajbls.20150302.13
ACS Style
Salwa Selim Afifi; Zeinab Helal Helal; Safaa Shawky Hassan; Sally Tohamy Kamal. Analysis of GNB Species and Pattern of Resistance Responsible for LRTI in Patients with Cancer. Am. J. Biomed. Life Sci. 2015, 3(2), 25-32. doi: 10.11648/j.ajbls.20150302.13
AMA Style
Salwa Selim Afifi, Zeinab Helal Helal, Safaa Shawky Hassan, Sally Tohamy Kamal. Analysis of GNB Species and Pattern of Resistance Responsible for LRTI in Patients with Cancer. Am J Biomed Life Sci. 2015;3(2):25-32. doi: 10.11648/j.ajbls.20150302.13
@article{10.11648/j.ajbls.20150302.13, author = {Salwa Selim Afifi and Zeinab Helal Helal and Safaa Shawky Hassan and Sally Tohamy Kamal}, title = {Analysis of GNB Species and Pattern of Resistance Responsible for LRTI in Patients with Cancer}, journal = {American Journal of Biomedical and Life Sciences}, volume = {3}, number = {2}, pages = {25-32}, doi = {10.11648/j.ajbls.20150302.13}, url = {https://doi.org/10.11648/j.ajbls.20150302.13}, eprint = {https://article.sciencepublishinggroup.com/pdf/10.11648.j.ajbls.20150302.13}, abstract = {Lower respiratory tract infection (LRTI) is the most lethal infection remains among patients undergoing treatment for cancer. Most of the previous studies with cancer patients have focus on blood stream infections. For that reason the aim of our study was to examine the spectrum and recent trends in antimicrobial resistance of Gram negative bacteria (GNB) recovered from cancer patient having LRTI in Egypt. In addition our objective was to investigate the prevalence and distribution of Legionella pneumophila among cancer patients with LRTI. Sputum specimens were collected from 285 cancer patients suspecting of having LRTI. The conventional methods and Microscan Negative Identification panel Type 2 were used for identification of GNB. Susceptibility was assessed for 20 antibiotics in bacterial isolates using agar diffusion method. All the sputum specimens were tested by culture and genus specific PCR for the detection of Legionella pneumophila. A total of 130 GNB were isolated. Among these, Klebsiella pneumoniae was the most common (35.4 %). We isolated and identified a number of less frequent GNB (17%), whereas no Legionella pneumophila was detected. Amikacin was found to be the most effective antimicrobial against GNB. We reported very high percentage of multi-drug resistance GNB (96%). This study reported the development of multidrug resistance Gram negative bacilli in Egypt. Continuous updating of data on antimicrobial susceptibility profiles is required to ensure the efficacy of antimicrobial agents against GNB due to continuous development of antimicrobial resistance patterns among these pathogens.}, year = {2015} }
TY - JOUR T1 - Analysis of GNB Species and Pattern of Resistance Responsible for LRTI in Patients with Cancer AU - Salwa Selim Afifi AU - Zeinab Helal Helal AU - Safaa Shawky Hassan AU - Sally Tohamy Kamal Y1 - 2015/04/18 PY - 2015 N1 - https://doi.org/10.11648/j.ajbls.20150302.13 DO - 10.11648/j.ajbls.20150302.13 T2 - American Journal of Biomedical and Life Sciences JF - American Journal of Biomedical and Life Sciences JO - American Journal of Biomedical and Life Sciences SP - 25 EP - 32 PB - Science Publishing Group SN - 2330-880X UR - https://doi.org/10.11648/j.ajbls.20150302.13 AB - Lower respiratory tract infection (LRTI) is the most lethal infection remains among patients undergoing treatment for cancer. Most of the previous studies with cancer patients have focus on blood stream infections. For that reason the aim of our study was to examine the spectrum and recent trends in antimicrobial resistance of Gram negative bacteria (GNB) recovered from cancer patient having LRTI in Egypt. In addition our objective was to investigate the prevalence and distribution of Legionella pneumophila among cancer patients with LRTI. Sputum specimens were collected from 285 cancer patients suspecting of having LRTI. The conventional methods and Microscan Negative Identification panel Type 2 were used for identification of GNB. Susceptibility was assessed for 20 antibiotics in bacterial isolates using agar diffusion method. All the sputum specimens were tested by culture and genus specific PCR for the detection of Legionella pneumophila. A total of 130 GNB were isolated. Among these, Klebsiella pneumoniae was the most common (35.4 %). We isolated and identified a number of less frequent GNB (17%), whereas no Legionella pneumophila was detected. Amikacin was found to be the most effective antimicrobial against GNB. We reported very high percentage of multi-drug resistance GNB (96%). This study reported the development of multidrug resistance Gram negative bacilli in Egypt. Continuous updating of data on antimicrobial susceptibility profiles is required to ensure the efficacy of antimicrobial agents against GNB due to continuous development of antimicrobial resistance patterns among these pathogens. VL - 3 IS - 2 ER -